# NGS Analysis Workbench (ChatGPT Plugin)

> Analyze sequencing data

- Type: plugin
- Publisher: OpenAI (official)
- Categories: Research
- Website: https://chatgpt.com/plugins/Plugin_32edf73dc4f48191980d50e2cad2b3e4
- Open in ChatGPT: https://chatgpt.com/plugins/Plugin_32edf73dc4f48191980d50e2cad2b3e4
- Version: 0.2.18
- Listed: 2026-10-04

## About

A journey-oriented NGS workbench for FASTQ QC, bulk RNA-seq, and single-cell RNA-seq. Focused skills establish the user's starting point, design toward a scientific outcome, bind that design to live Nextflow/nf-core or Snakemake capabilities, preserve checksum-bound native approval, and interpret completed results from file-backed evidence.

## Install

1. **Add it in ChatGPT** Open Plugins in the ChatGPT sidebar (web or desktop), search for “NGS Analysis Workbench” and select +. You'll be asked to sign in to any connected service on first use. Then type @ in a chat to call it.

> Runs locally: needs the ChatGPT desktop app or Codex with local execution enabled.

## Skills

- **Design NGS Analysis**: Turn a scientific outcome into a defensible plan
- **NGS Analysis Workbench**: Route and continue an NGS analysis journey
- **Run NGS Analysis**: Plan, approve, run, monitor, and recover NGS work
- **Understand NGS Data**: Establish an evidence-backed NGS starting point
- **Understand NGS Results**: Connect NGS evidence to the scientific objective

## Example prompts

- "run a FastQC and Salmon QC on a public RNA-seq dataset and provide an interpretation of the results."
- "run a scRNA-seq analysis with STARsolo on a public dataset and provide an interpretation of the results."
- "run a NGS analysis on my sequencing data in my project."

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Source: https://chatgptplugins.directory/plugins/ngs-analysis-workbench · Index: https://chatgptplugins.directory/llms.txt · Independent and community-run. Not affiliated with or endorsed by OpenAI. ChatGPT is a trademark of OpenAI.